MeshUnStruct.h

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#ifndef MESHUNSTRUCT_H
#define MESHUNSTRUCT_H
 
#include "Mesh.h"
#include "MeshUnStruct/MUSGmsh/HeaderElements.h"
#include "../Order2/CellInterfaceO2NS.h"
#include "../Order2/CellO2NS.h"
#include "../InputOutput/IO.h"
 
class MeshUnStruct : public Mesh
{
public:
  MeshUnStruct(const std::string& meshFile, const std::string& meshExtension);
  virtual ~MeshUnStruct();
 
  static std::string readMeshFileExtension(const std::string& meshFile);
 
  // --- Mesh virtual member functions ---
  virtual void assignLimits(std::vector<BoundCond*>& boundCond);
  virtual int initializeGeometrie(TypeMeshContainer<Cell*>& cells, TypeMeshContainer<Cell*>& cellsGhost, TypeMeshContainer<CellInterface*>& cellInterfaces,
    const int& /*restartSimulation*/, bool pretraitementParallele = true, std::string ordreCalcul = "FIRSTORDER");
  virtual std::string whoAmI() const { return 0; };
 
  // --- MeshUnStruct virtual member functions --- 
  virtual void initGeometryMonoCPU(TypeMeshContainer<Cell*>& cells, TypeMeshContainer<CellInterface*>& cellInterfaces, std::string computeOrder = "FIRSTORDER") = 0;
  virtual void initGeometryParallel(TypeMeshContainer<Cell*>& cells, TypeMeshContainer<Cell*>& cellsGhost, TypeMeshContainer<CellInterface*>& cellInterfaces, std::string computeOrder = "FIRSTORDER") = 0;
  virtual void preProcessMeshFileForParallel() = 0;
  virtual void initCpuMeshSequential(TypeMeshContainer<Cell*>& cells, std::string &computeOrder) = 0;
  virtual void initCpuMeshParallel(TypeMeshContainer<Cell*>& cells, std::string &computeOrder, int cpu) = 0;
 
  // Printing / Reading
  void writeMeshInfoData() const;
  virtual void writeHeaderPiece(std::ofstream& fileStream, TypeMeshContainer<Cell*>* /*cellsLvl*/) const;
  virtual void getNodes(std::vector<double>& dataset, std::vector<Cell*>* /*cellsLvl*/) const;
  virtual void getConnectivity(std::vector<double>& dataset, std::vector<Cell*>* /*cellsLvl*/) const;
  virtual void getOffsets(std::vector<double>& dataset, std::vector<Cell*>* /*cellsLvl*/) const;
  virtual void getTypeCell(std::vector<double>& dataset, std::vector<Cell*>* /*cellsLvl*/) const;
  virtual void getData(TypeMeshContainer<Cell*>* cellsLvl, std::vector<double>& dataset, const int var, int phase) const;
  virtual void setDataSet(std::vector<double>& dataset, TypeMeshContainer<Cell*>* cellsLvl, const int var, int phase) const;
  virtual void extractAbsVelocityMRF(TypeMeshContainer<Cell*>* cellsLvl, std::vector<double>& dataset, Source* sourceMRF) const;
  virtual void extractReferenceLength(std::vector<Cell*>* cellsLvl, std::vector<double>& dataset) const;
 
protected:
  std::string m_meshFile;  
  std::string m_nameMesh;  
 
  int m_numberNodes;                  
  int m_numberInnerNodes;             
  Coord* m_nodes;                     
  int m_numberInnerElements;          
  int m_numberGhostElements;          
  int m_numberCommunicatingElements;  
  ElementNS** m_elements;             
  FaceNS** m_faces;                   
  std::vector<BoundCond*> m_bound;    
 
  int m_numberInnerFaces;          
  int m_numberBoundFaces;          
  int m_numberFacesParallel;       
 
  int m_numberGhostCells;           
 
  int m_numberElements0D;
  int m_numberElements1D;
  int m_numberElements2D;
  int m_numberElements3D;
  int m_numberSegments;
  int m_numberTriangles;
  int m_numberQuadrangles;
  int m_numberTetrahedrons;
  int m_numberPyramids;
  int m_numberPoints;
  int m_numberHexahedrons;
 
  //statistics
  double m_totalSurface;    
  double m_totalVolume;     
};
 
#endif // MESHUNSTRUCT_H