Cell Class Reference

Base class for a mesh cell. More...

#include <Cell.h>

Inherited by CellGhost, and CellO2.

Public Member Functions
	Cell ()
	Basic Cell constructor for a non AMR cell.
	Cell (int lvl)
	Cell constructor for an AMR cell.
virtual	~Cell ()
void	addCellInterface (CellInterface *cellInterface)
	Add a cell interface to current cell.
void	deleteCellInterface (CellInterface *cellInterface)
	Delete the cell interface of current cell.
void	associateExtVar (Model *mod, Gradient *grad)
	Associate external variables.
virtual void	allocate (const std::vector< AddPhys * > &addPhys)
	Memory allocation of cell attributes.
void	allocateEos ()
void	fill (std::vector< GeometricalDomain * > &domains, const int &)
	Filling cell properties using a physical domain.
virtual void	copyPhase (const int &phaseNumber, Phase *phase)
void	copyMixture (Mixture *mixture)
void	setToZeroCons ()
void	setToZeroConsGlobal ()
void	timeEvolution (const double &dt, Symmetry *symmetry)
void	timeEvolutionAddPhys (const double &dt)
void	buildPrim ()
void	buildCons ()
void	correctionEnergy ()
void	sourceTermIntegration (const double &)
void	printPhasesMixture (std::ofstream &fileStream) const
virtual void	completeFulfillState ()
virtual void	fulfillState (Prim=vecPhases)
void	fulfillStateRestart ()
void	localProjection (const Coord &normal, const Coord &tangent, const Coord &binormal, Prim=vecPhases)
virtual void	reverseProjection (const Coord &normal, const Coord &tangent, const Coord &binormal)
virtual void	copyInCell (Cell &) const
void	copyVec (Phase **vecPhases, Mixture *mixture, Transport *vecTransports)
void	deleteInterface (const int &b)
void	prepareAddPhys ()
Coord	selectVector (Variable nameVector, int num=0, int subscript=-1) const
void	setVector (Variable nameVector, const Coord &value, int num=0, int subscript=-1)
const QuantitiesAddPhys *	getQPA (int &numQPA) const
const Coord &	getGradTk (int &numPhase, int &numAddPhys) const
	Allow to recover an additional physical quantity.
void	setGradTk (int &numPhase, int &numAddPhys, double *buffer, int &counter)
void	addNonConsAddPhys (AddPhys &addPhys, Symmetry *symmetry)
void	reinitializeColorFunction (const int &numTransport, const int &numPhase)
	Re-initialize the color function (transport) with alpha.
void	computeGradients (std::vector< Coord > &grads, std::vector< Variable > &nameVariables, std::vector< int > &numPhases)
	Compute gradients (temperature, velocity, density) of a cell.
int	getCellInterfacesSize () const
CellInterface *	getCellInterface (const int &b)
void	setCellInterface (const int &b, CellInterface *cellInterface)
virtual Phase *	getPhase (const int &phaseNumber, Prim=vecPhases) const
virtual Phase **	getPhases (Prim=vecPhases) const
virtual Mixture *	getMixture (Prim=vecPhases) const
Flux *	getCons () const
void	setCons (Flux *cons)
const Coord &	getPosition () const
const Coord &	getSize () const
const double &	getSizeX () const
const double &	getSizeY () const
const double &	getSizeZ () const
void	setElement (Element *element, const int &numCell)
Element *	getElement () const
virtual void	setTransport (double value, int &numTransport, Prim=vecPhases)
virtual Transport &	getTransport (const int &numTransport, Prim=vecPhases) const
virtual Transport *	getTransports (Prim=vecPhases) const
Transport *	getConsTransport (const int &numTransport) const
void	setConsTransport (double value, const int &numTransport)
std::vector< QuantitiesAddPhys * > &	getVecQuantitiesAddPhys ()
const int &	getNumberPhases () const
const int &	getNumberTransports () const
double	getDensityGradient ()
Model *	getModel ()
Coord &	getVelocity ()
const Coord &	getVelocity () const
void	setWall (bool wall)
bool	getWall () const
double	selectScalar (Variable nameVariable, int num=0) const
	Select a specific scalar variable.
virtual void	allocateSecondOrderBuffersAndGradientVectors (Phase **, Mixture *)
	Compute global variable buffers (min, max, etc.) and initialize speficic gradient vectors for 2nd-order scheme on unstructured mesh.
virtual void	computeGradientsO2 ()
	Compute gradients for 2nd-order scheme on unstructured mesh.
virtual void	limitGradientsO2 (Limiter &)
virtual void	computeLocalSlopes (CellInterface &)
	Compute slopes for 2nd-order scheme on unstructured mesh.
virtual void	computeLocalSlopes (CellInterface &, Limiter &, Limiter &, Limiter &, Limiter &, double &, double &, double &, double &)
virtual void	computeLocalSlopesLimite (CellInterface &, Limiter &, Limiter &, Limiter &, Limiter &, double &)
virtual Phase *	getSlopes () const
virtual Transport *	getSlopesTransport () const
virtual void	saveCons ()
virtual void	getBackCons ()
virtual void	predictionOrdre2 (const double &, Symmetry *)
double	distance (Cell *c)
double	distanceX (Cell *c)
double	distanceY (Cell *c)
double	distanceZ (Cell *c)
double	distance (CellInterface *b)
double	distanceX (CellInterface *b)
double	distanceY (CellInterface *b)
double	distanceZ (CellInterface *b)
bool	traverseObjet (const GeometricObject &objet) const
void	printInfo () const
double	getPsat ()
	Compute saturation pressure for a liquid/vapor fluid mixture (first phase is considered predominant -> not generalized be careful)
bool	printGnuplotAMR (std::ofstream &fileStream, const int &dim, GeometricObject *objet=0, bool recordPsat=false)
void	computeVolumePhaseK (double &integration, const int &numPhase)
void	computeMass (double &mass, double &alphaRef)
void	computeTotalMass (double &mass)
void	computeTotalEnergy (double &totalEnergy)
void	lookForPmax (double *pMax, double *pMaxWall)
void	setToZeroXi ()
void	setToZeroConsXi ()
void	timeEvolutionXi ()
void	chooseRefine (const double &xiSplit, const int &nbCellsY, const int &nbCellsZ, const std::vector< AddPhys * > &addPhys, int &nbCellsTotalAMR)
void	chooseUnrefine (const double &xiJoin, int &nbCellsTotalAMR)
void	refineCellAndCellInterfaces (const int &nbCellsY, const int &nbCellsZ, const std::vector< AddPhys * > &addPhys, const bool &refineExternalCellInterfaces)
virtual void	createChildCell (const int &lvl)
void	unrefineCellAndCellInterfaces ()
void	averageChildrenInParent ()
bool	lvlNeighborTooHigh ()
bool	lvlNeighborTooLow ()
void	buildLvlCellsAndLvlInternalCellInterfacesArrays (std::vector< Cell * > *cellsLvl, std::vector< CellInterface * > *cellInterfacesLvl)
const int &	getLvl () const
const bool &	getSplit () const
const double &	getXi () const
void	setXi (double value)
void	addFluxXi (double value)
int	getNumberCellsChildren ()
Cell *	getCellChild (const int &num)
std::vector< Cell * > *	getChildVector ()
virtual void	pushBackSlope ()
virtual void	popBackSlope ()
virtual int	getRankOfNeighborCPU () const
virtual void	setRankOfNeighborCPU (int)
void	fillBufferPrimitives (double *buffer, int &counter, const int &lvl, const int &neighbour, Prim type=vecPhases) const
void	getBufferPrimitives (double *buffer, int &counter, const int &lvl, Eos **eos, Prim type=vecPhases)
void	fillBufferVector (double *buffer, int &counter, const int &lvl, const int &neighbour, const int &dim, Variable nameVector, int num=0, int index=-1) const
void	getBufferVector (double *buffer, int &counter, const int &lvl, const int &dim, Variable nameVector, int num=0, int index=-1)
void	fillBufferTransports (double *buffer, int &counter, const int &lvl, const int &neighbour) const
void	getBufferTransports (double *buffer, int &counter, const int &lvl)
virtual void	fillBufferSlopes (double *, int &, const int &, const int &) const
virtual void	getBufferSlopes (double *, int &, const int &)
virtual bool	isCellGhost () const
bool	hasNeighboringGhostCellOfCPUneighbour (const int &neighbour) const
int	numberOfNeighboringGhostCellsOfCPUneighbour (const int &neighbour) const
virtual GradPhase *	getGradPhase (const int &) const
virtual GradMixture *	getGradMixture () const
virtual GradTransport *	getGradTransport (const int &) const
void	chooseRefineDeraffineGhost (const int &nbCellsY, const int &nbCellsZ, const std::vector< AddPhys * > &addPhys, std::vector< Cell * > *cellsLvlGhost)
void	refineCellAndCellInterfacesGhost (const int &nbCellsY, const int &nbCellsZ, const std::vector< AddPhys * > &addPhys)
void	unrefineCellAndCellInterfacesGhost ()
void	fillBufferXi (double *buffer, int &counter, const int &lvl, const int &neighbour) const
void	getBufferXi (double *buffer, int &counter, const int &lvl)
void	fillBufferSplit (bool *buffer, int &counter, const int &lvl, const int &neighbour) const
void	getBufferSplit (bool *buffer, int &counter, const int &lvl)
void	fillNumberElementsToSendToNeighbour (int &numberElementsToSendToNeighbor, int &numberSlopesToSendToNeighbor, const int &lvl, const int &neighbour, int numberNeighboursOfCPUneighbour)
void	fillDataToSend (std::vector< double > &dataToSend, std::vector< int > &dataSplitToSend, const int &lvl) const
void	getDataToReceiveAndRefine (std::vector< double > &dataToReceive, std::vector< int > &dataSplitToReceive, const int &lvl, Eos **eos, int &counter, int &counterSplit, const int &nbCellsY, const int &nbCellsZ, const std::vector< AddPhys * > &addPhys)
void	computeLoad (double &load, int lvl) const
void	computeLvlMax (int &lvlMax) const
void	clearExternalCellInterfaces (const int &nbCellsY, const int &nbCellsZ)
void	updatePointersInternalCellInterfaces ()
void	updateNbCellsTotalAMR (int &nbCellsTotalAMR)

Protected Attributes
bool	m_wall
Phase **	m_vecPhases
Mixture *	m_mixture
Transport *	m_vecTransports
Flux *	m_cons
Transport *	m_consTransports
Element *	m_element
std::vector< CellInterface * >	m_cellInterfaces
std::vector< QuantitiesAddPhys * >	m_vecQuantitiesAddPhys
int	m_lvl
double	m_xi
double	m_consXi
bool	m_split
std::vector< Cell * >	m_childrenCells
std::vector< CellInterface * >	m_childrenInternalCellInterfaces

Detailed Description

Base class for a mesh cell.

Constructor & Destructor Documentation

Cell() [1/2]

Cell::Cell

(

)

Basic Cell constructor for a non AMR cell.

Cell() [2/2]

Cell::Cell

(

int

lvl

)

Cell constructor for an AMR cell.

Parameters

lvl	level of current AMR cell

~Cell()

Cell::~Cell ( )

virtual

Member Function Documentation

addCellInterface()

void Cell::addCellInterface

(

CellInterface *

cellInterface

)

Add a cell interface to current cell.

Parameters

cellInterface

pointer to added cell interface

addFluxXi()

void Cell::addFluxXi

(

double

value

)

Add xi cell flux

addNonConsAddPhys()

void Cell::addNonConsAddPhys	(	AddPhys &	addPhys,
		Symmetry *	symmetry
	)

allocate()

void Cell::allocate ( const std::vector< AddPhys * > &  addPhys )

virtual

Memory allocation of cell attributes.

Parameters

addPhys

vector of additional physics

Reimplemented in CellO2, CellO2GhostCartesian, and CellO2NS.

allocateEos()

void Cell::allocateEos

(

)

allocateSecondOrderBuffersAndGradientVectors()

virtual void Cell::allocateSecondOrderBuffersAndGradientVectors ( Phase **  , Mixture *    )

inlinevirtual

Compute global variable buffers (min, max, etc.) and initialize speficic gradient vectors for 2nd-order scheme on unstructured mesh.

Reimplemented in CellO2, and CellO2NS.

associateExtVar()

void Cell::associateExtVar	(	Model *	mod,
		Gradient *	grad
	)

Associate external variables.

Parameters

mod	pointer to model
grad	pointer to gradient method

averageChildrenInParent()

void Cell::averageChildrenInParent

(

)

Average variables of children cells in the parent cell, needed for computation of xi.

buildCons()

void Cell::buildCons

(

)

buildLvlCellsAndLvlInternalCellInterfacesArrays()

void Cell::buildLvlCellsAndLvlInternalCellInterfacesArrays	(	std::vector< Cell * > *	cellsLvl,
		std::vector< CellInterface * > *	cellInterfacesLvl
	)

Build new arrays of cells and cell interfaces for level (lvl+1), only internal cell interfaces are added here

buildPrim()

void Cell::buildPrim

(

)

chooseRefine()

void Cell::chooseRefine	(	const double &	xiSplit,
		const int &	nbCellsY,
		const int &	nbCellsZ,
		const std::vector< AddPhys * > &	addPhys,
		int &	nbCellsTotalAMR
	)

Choice for refinement of parent cell

chooseRefineDeraffineGhost()

void Cell::chooseRefineDeraffineGhost	(	const int &	nbCellsY,
		const int &	nbCellsZ,
		const std::vector< AddPhys * > &	addPhys,
		std::vector< Cell * > *	cellsLvlGhost
	)

Choice for refinement, unrefinement of the ghost parent cell + Update of ghost cell vector for lvl+1

chooseUnrefine()

void Cell::chooseUnrefine	(	const double &	xiJoin,
		int &	nbCellsTotalAMR
	)

Choice for unrefinement of parent cell

clearExternalCellInterfaces()

void Cell::clearExternalCellInterfaces	(	const int &	nbCellsY,
		const int &	nbCellsZ
	)

completeFulfillState()

void Cell::completeFulfillState ( )

virtual

computeGradients()

void Cell::computeGradients	(	std::vector< Coord > &	grads,
		std::vector< Variable > &	nameVariables,
		std::vector< int > &	numPhases
	)

Compute gradients (temperature, velocity, density) of a cell.

Parameters

grads	Array of desired gradients, e.g. for temperature each component represents phase temperature and for velocity each component represents the gradient of a velocity component (grad(u), grad(v), grad(w))
nameVariables	Name of the variable for which the gradient is calculated
numPhases	Phases number's

computeGradientsO2()

virtual void Cell::computeGradientsO2 ( )

inlinevirtual

Compute gradients for 2nd-order scheme on unstructured mesh.

Reimplemented in CellO2, and CellO2NS.

computeLoad()

void Cell::computeLoad	(	double &	load,
		int	lvl
	)		const

computeLocalSlopes() [1/2]

virtual void Cell::computeLocalSlopes ( CellInterface &  )

inlinevirtual

Compute slopes for 2nd-order scheme on unstructured mesh.

Reimplemented in CellO2, and CellO2NS.

computeLocalSlopes() [2/2]

virtual void Cell::computeLocalSlopes ( CellInterface &  , Limiter &  , Limiter &  , Limiter &  , Limiter &  , double &  , double &  , double &  , double &    )

inlinevirtual

Reimplemented in CellO2, CellO2Cartesian, and CellO2GhostCartesian.

computeLocalSlopesLimite()

virtual void Cell::computeLocalSlopesLimite ( CellInterface &  , Limiter &  , Limiter &  , Limiter &  , Limiter &  , double &    )

inlinevirtual

Does nothing for first order cells

Reimplemented in CellO2, and CellO2Cartesian.

computeLvlMax()

void Cell::computeLvlMax

(

int &

lvlMax

)

const

computeMass()

void Cell::computeMass	(	double &	mass,
		double &	alphaRef
	)

computeTotalEnergy()

void Cell::computeTotalEnergy

(

double &

totalEnergy

)

computeTotalMass()

void Cell::computeTotalMass

(

double &

mass

)

computeVolumePhaseK()

void Cell::computeVolumePhaseK	(	double &	integration,
		const int &	numPhase
	)

copyInCell()

virtual void Cell::copyInCell ( Cell &  ) const

inlinevirtual

copyMixture()

void Cell::copyMixture

(

Mixture *

mixture

)

copyPhase()

void Cell::copyPhase ( const int &  phaseNumber, Phase *  phase  )

virtual

Reimplemented in CellO2.

copyVec()

void Cell::copyVec	(	Phase **	vecPhases,
		Mixture *	mixture,
		Transport *	vecTransports
	)

correctionEnergy()

void Cell::correctionEnergy

(

)

createChildCell()

void Cell::createChildCell ( const int &  lvl )

virtual

Create a child cell (not initialized)

Reimplemented in CellO2, CellGhost, CellO2Cartesian, and CellO2GhostCartesian.

deleteCellInterface()

void Cell::deleteCellInterface

(

CellInterface *

cellInterface

)

Delete the cell interface of current cell.

Parameters

cellInterface

pointer to deleted cell interface

deleteInterface()

void Cell::deleteInterface

(

const int &

b

)

distance() [1/2]

double Cell::distance

(

Cell *

c

)

Does nothing for first order cells Distance totale

distance() [2/2]

double Cell::distance

(

CellInterface *

b

)

Distance totale

distanceX() [1/2]

double Cell::distanceX

(

Cell *

c

)

Distance selon x

distanceX() [2/2]

double Cell::distanceX

(

CellInterface *

b

)

Distance selon x

distanceY() [1/2]

double Cell::distanceY

(

Cell *

c

)

Distance selon y

distanceY() [2/2]

double Cell::distanceY

(

CellInterface *

b

)

Distance selon y

distanceZ() [1/2]

double Cell::distanceZ

(

Cell *

c

)

Distance selon z

distanceZ() [2/2]

double Cell::distanceZ

(

CellInterface *

b

)

Distance selon z

fill()

void Cell::fill	(	std::vector< GeometricalDomain * > &	domains,
		const int &
	)

Filling cell properties using a physical domain.

Parameters

domains

domain used for filling

fillBufferPrimitives()

void Cell::fillBufferPrimitives	(	double *	buffer,
		int &	counter,
		const int &	lvl,
		const int &	neighbour,
		Prim	type = vecPhases
	)		const

Does nothing for non-ghost cells

fillBufferSlopes()

virtual void Cell::fillBufferSlopes ( double *  , int &  , const int &  , const int &    ) const

inlinevirtual

Reimplemented in CellO2, CellO2NS, and CellO2Cartesian.

fillBufferSplit()

void Cell::fillBufferSplit	(	bool *	buffer,
		int &	counter,
		const int &	lvl,
		const int &	neighbour
	)		const

fillBufferTransports()

void Cell::fillBufferTransports	(	double *	buffer,
		int &	counter,
		const int &	lvl,
		const int &	neighbour
	)		const

fillBufferVector()

void Cell::fillBufferVector	(	double *	buffer,
		int &	counter,
		const int &	lvl,
		const int &	neighbour,
		const int &	dim,
		Variable	nameVector,
		int	num = 0,
		int	index = -1
	)		const

fillBufferXi()

void Cell::fillBufferXi	(	double *	buffer,
		int &	counter,
		const int &	lvl,
		const int &	neighbour
	)		const

fillDataToSend()

void Cell::fillDataToSend	(	std::vector< double > &	dataToSend,
		std::vector< int > &	dataSplitToSend,
		const int &	lvl
	)		const

fillNumberElementsToSendToNeighbour()

void Cell::fillNumberElementsToSendToNeighbour	(	int &	numberElementsToSendToNeighbor,
		int &	numberSlopesToSendToNeighbor,
		const int &	lvl,
		const int &	neighbour,
		int	numberNeighboursOfCPUneighbour
	)

fulfillState()

void Cell::fulfillState ( Prim  = vecPhases )

virtual

Reimplemented in CellO2.

fulfillStateRestart()

void Cell::fulfillStateRestart

(

)

getBackCons()

virtual void Cell::getBackCons ( )

inlinevirtual

Does nothing for first order cells

Reimplemented in CellO2.

getBufferPrimitives()

void Cell::getBufferPrimitives	(	double *	buffer,
		int &	counter,
		const int &	lvl,
		Eos **	eos,
		Prim	type = vecPhases
	)

getBufferSlopes()

virtual void Cell::getBufferSlopes ( double *  , int &  , const int &    )

inlinevirtual

Does nothing for first order cells

Reimplemented in CellO2, CellO2Cartesian, CellO2NS, CellO2GhostNS, and CellO2GhostCartesian.

getBufferSplit()

void Cell::getBufferSplit	(	bool *	buffer,
		int &	counter,
		const int &	lvl
	)

getBufferTransports()

void Cell::getBufferTransports	(	double *	buffer,
		int &	counter,
		const int &	lvl
	)

getBufferVector()

void Cell::getBufferVector	(	double *	buffer,
		int &	counter,
		const int &	lvl,
		const int &	dim,
		Variable	nameVector,
		int	num = 0,
		int	index = -1
	)

getBufferXi()

void Cell::getBufferXi	(	double *	buffer,
		int &	counter,
		const int &	lvl
	)

getCellChild()

Cell * Cell::getCellChild

(

const int &

num

)

Return pointer to the corresponding child cell number

getCellInterface()

CellInterface * Cell::getCellInterface

(

const int &

b

)

getCellInterfacesSize()

int Cell::getCellInterfacesSize

(

)

const

getChildVector()

std::vector< Cell * > * Cell::getChildVector

(

)

Return pointer to child vector

getCons()

Flux * Cell::getCons

(

)

const

getConsTransport()

Transport * Cell::getConsTransport

(

const int &

numTransport

)

const

getDataToReceiveAndRefine()

void Cell::getDataToReceiveAndRefine	(	std::vector< double > &	dataToReceive,
		std::vector< int > &	dataSplitToReceive,
		const int &	lvl,
		Eos **	eos,
		int &	counter,
		int &	counterSplit,
		const int &	nbCellsY,
		const int &	nbCellsZ,
		const std::vector< AddPhys * > &	addPhys
	)

getDensityGradient()

double Cell::getDensityGradient

(

)

getElement()

Element * Cell::getElement

(

)

const

getGradMixture()

virtual GradMixture * Cell::getGradMixture ( ) const

inlinevirtual

Reimplemented in CellO2, and CellO2NS.

getGradPhase()

virtual GradPhase * Cell::getGradPhase ( const int &  ) const

inlinevirtual

Reimplemented in CellO2, and CellO2NS.

getGradTk()

const Coord & Cell::getGradTk	(	int &	numPhase,
		int &	numAddPhys
	)		const

Allow to recover an additional physical quantity.

getGradTransport()

virtual GradTransport * Cell::getGradTransport ( const int &  ) const

inlinevirtual

Reimplemented in CellO2, and CellO2NS.

getLvl()

const int & Cell::getLvl ( ) const

inline

getMixture()

Mixture * Cell::getMixture ( Prim  = vecPhases ) const

virtual

Reimplemented in CellO2.

getModel()

Model * Cell::getModel

(

)

getNumberCellsChildren()

int Cell::getNumberCellsChildren

(

)

Return the number of children cells

getNumberPhases()

const int & Cell::getNumberPhases

(

)

const

getNumberTransports()

const int & Cell::getNumberTransports

(

)

const

getPhase()

Phase * Cell::getPhase ( const int &  phaseNumber, Prim  = vecPhases  ) const

virtual

Reimplemented in CellO2.

getPhases()

Phase ** Cell::getPhases ( Prim  = vecPhases ) const

virtual

Reimplemented in CellO2.

getPosition()

const Coord & Cell::getPosition ( ) const

inline

getPsat()

double Cell::getPsat

(

)

Compute saturation pressure for a liquid/vapor fluid mixture (first phase is considered predominant -> not generalized be careful)

getQPA()

const QuantitiesAddPhys * Cell::getQPA ( int &  numQPA ) const

inline

getRankOfNeighborCPU()

virtual int Cell::getRankOfNeighborCPU ( ) const

inlinevirtual

Does nothing for non-ghost O2 cells

Reimplemented in CellGhost, CellO2GhostCartesian, and CellO2GhostNS.

getSize()

const Coord & Cell::getSize ( ) const

inline

getSizeX()

const double & Cell::getSizeX ( ) const

inline

getSizeY()

const double & Cell::getSizeY ( ) const

inline

getSizeZ()

const double & Cell::getSizeZ ( ) const

inline

getSlopes()

virtual Phase * Cell::getSlopes ( ) const

inlinevirtual

Does nothing for first order cells

getSlopesTransport()

virtual Transport * Cell::getSlopesTransport ( ) const

inlinevirtual

Does nothing for first order cells

getSplit()

const bool & Cell::getSplit ( ) const

inline

Get the cell AMR level in the AMR tree

getTransport()

Transport & Cell::getTransport ( const int &  numTransport, Prim  = vecPhases  ) const

virtual

Reimplemented in CellO2.

getTransports()

Transport * Cell::getTransports ( Prim  = vecPhases ) const

virtual

Reimplemented in CellO2.

getVecQuantitiesAddPhys()

std::vector< QuantitiesAddPhys * > & Cell::getVecQuantitiesAddPhys

(

)

getVelocity() [1/2]

Coord & Cell::getVelocity

(

)

getVelocity() [2/2]

const Coord & Cell::getVelocity

(

)

const

getWall()

bool Cell::getWall ( ) const

inline

getXi()

const double & Cell::getXi ( ) const

inline

Return true if the cells is plit, false otherwise

hasNeighboringGhostCellOfCPUneighbour()

bool Cell::hasNeighboringGhostCellOfCPUneighbour

(

const int &

neighbour

)

const

Return a bool that is true if the cell has a neighboring ghost cell corresponding to CPU "neighbour"

isCellGhost()

virtual bool Cell::isCellGhost ( ) const

inlinevirtual

Does nothing for first order cells

Reimplemented in CellGhost, and CellO2GhostCartesian.

limitGradientsO2()

virtual void Cell::limitGradientsO2 ( Limiter &  )

inlinevirtual

Reimplemented in CellO2, and CellO2NS.

localProjection()

void Cell::localProjection	(	const Coord &	normal,
		const Coord &	tangent,
		const Coord &	binormal,
		Prim	= vecPhases
	)

lookForPmax()

void Cell::lookForPmax	(	double *	pMax,
		double *	pMaxWall
	)

lvlNeighborTooHigh()

bool Cell::lvlNeighborTooHigh

(

)

Look for AMR level of neighboring cells if too high to unrefine

lvlNeighborTooLow()

bool Cell::lvlNeighborTooLow

(

)

Look for AMR level of neighboring cells if too low to refine

numberOfNeighboringGhostCellsOfCPUneighbour()

int Cell::numberOfNeighboringGhostCellsOfCPUneighbour

(

const int &

neighbour

)

const

Return the number of neighboring ghost cells corresponding to CPU "neighbour" this cell has

popBackSlope()

virtual void Cell::popBackSlope ( )

inlinevirtual

Does nothing for non-ghost O2 cells

Reimplemented in CellO2GhostCartesian.

predictionOrdre2()

virtual void Cell::predictionOrdre2 ( const double &  , Symmetry *    )

inlinevirtual

Does nothing for first order cells

Reimplemented in CellO2.

prepareAddPhys()

void Cell::prepareAddPhys

(

)

printGnuplotAMR()

bool Cell::printGnuplotAMR	(	std::ofstream &	fileStream,
		const int &	dim,
		GeometricObject *	objet = 0,
		bool	recordPsat = false
	)

printInfo()

void Cell::printInfo

(

)

const

printPhasesMixture()

void Cell::printPhasesMixture

(

std::ofstream &

fileStream

)

const

pushBackSlope()

virtual void Cell::pushBackSlope ( )

inlinevirtual

Reimplemented in CellO2GhostCartesian.

refineCellAndCellInterfaces()

void Cell::refineCellAndCellInterfaces	(	const int &	nbCellsY,
		const int &	nbCellsZ,
		const std::vector< AddPhys * > &	addPhys,
		const bool &	refineExternalCellInterfaces
	)

Refine parent cell by creation of children cells

refineCellAndCellInterfacesGhost()

void Cell::refineCellAndCellInterfacesGhost	(	const int &	nbCellsY,
		const int &	nbCellsZ,
		const std::vector< AddPhys * > &	addPhys
	)

Refinement of parent ghost cell by creation of children ghost cells

reinitializeColorFunction()

void Cell::reinitializeColorFunction	(	const int &	numTransport,
		const int &	numPhase
	)

Re-initialize the color function (transport) with alpha.

reverseProjection()

void Cell::reverseProjection ( const Coord &  normal, const Coord &  tangent, const Coord &  binormal  )

virtual

saveCons()

virtual void Cell::saveCons ( )

inlinevirtual

Does nothing for first order cells

Reimplemented in CellO2.

selectScalar()

double Cell::selectScalar	(	Variable	nameVariable,
		int	num = 0
	)		const

Select a specific scalar variable.

Parameters

nameVariables	Name of the variable to select
numPhases	Phases number's

selectVector()

Coord Cell::selectVector	(	Variable	nameVector,
		int	num = 0,
		int	subscript = -1
	)		const

setCellInterface()

void Cell::setCellInterface	(	const int &	b,
		CellInterface *	cellInterface
	)

setCons()

void Cell::setCons

(

Flux *

cons

)

setConsTransport()

void Cell::setConsTransport	(	double	value,
		const int &	numTransport
	)

setElement()

void Cell::setElement	(	Element *	element,
		const int &	numCell
	)

setGradTk()

void Cell::setGradTk	(	int &	numPhase,
		int &	numAddPhys,
		double *	buffer,
		int &	counter
	)

setRankOfNeighborCPU()

virtual void Cell::setRankOfNeighborCPU ( int  )

inlinevirtual

Reimplemented in CellGhost, CellO2GhostCartesian, and CellO2GhostNS.

setToZeroCons()

void Cell::setToZeroCons

(

)

setToZeroConsGlobal()

void Cell::setToZeroConsGlobal

(

)

setToZeroConsXi()

void Cell::setToZeroConsXi

(

)

set m_consXi to zero

setToZeroXi()

void Cell::setToZeroXi

(

)

set m_xi to zero

setTransport()

void Cell::setTransport ( double  value, int &  numTransport, Prim  = vecPhases  )

virtual

Reimplemented in CellO2.

setVector()

void Cell::setVector	(	Variable	nameVector,
		const Coord &	value,
		int	num = 0,
		int	subscript = -1
	)

setWall()

void Cell::setWall

(

bool

wall

)

setXi()

void Cell::setXi

(

double

value

)

Return Xi cell value Set the Xi cell value

sourceTermIntegration()

void Cell::sourceTermIntegration ( const double &  )

inline

timeEvolution()

void Cell::timeEvolution	(	const double &	dt,
		Symmetry *	symmetry
	)

timeEvolutionAddPhys()

void Cell::timeEvolutionAddPhys

(

const double &

dt

)

timeEvolutionXi()

void Cell::timeEvolutionXi

(

)

time evolution of Xi for smoothing

traverseObjet()

bool Cell::traverseObjet

(

const GeometricObject &

objet

)

const

unrefineCellAndCellInterfaces()

void Cell::unrefineCellAndCellInterfaces

(

)

Unrefine parent cell by destruction of children cells

unrefineCellAndCellInterfacesGhost()

void Cell::unrefineCellAndCellInterfacesGhost

(

)

Unrefinement of parent ghost cell by destruction of children ghost cells

updateNbCellsTotalAMR()

void Cell::updateNbCellsTotalAMR

(

int &

nbCellsTotalAMR

)

updatePointersInternalCellInterfaces()

void Cell::updatePointersInternalCellInterfaces

(

)

Member Data Documentation

m_cellInterfaces

std::vector<CellInterface*> Cell::m_cellInterfaces

protected

Vector of cell-interface pointers

m_childrenCells

std::vector<Cell*> Cell::m_childrenCells

protected

Vector of children cells pointers

m_childrenInternalCellInterfaces

std::vector<CellInterface*> Cell::m_childrenInternalCellInterfaces

protected

Vector of Internal children cell-interface pointers of the cell

m_cons

Flux* Cell::m_cons

protected

Conservative variables

m_consTransports

Transport* Cell::m_consTransports

protected

Array of fluxes for advected variables

m_consXi

double Cell::m_consXi

protected

Buffer variable for Xi fluxes

m_element

Element* Cell::m_element

protected

Pointer to corresponding geometrical mesh element

m_lvl

int Cell::m_lvl

protected

Cell AMR level in the AMR tree

m_mixture

Mixture* Cell::m_mixture

protected

Mixture

m_split

bool Cell::m_split

protected

Indicator for splitted cell (Do I possess children ?)

m_vecPhases

Phase** Cell::m_vecPhases

protected

Array of phases

m_vecQuantitiesAddPhys

std::vector<QuantitiesAddPhys*> Cell::m_vecQuantitiesAddPhys

protected

Vector of pointers to the Quantities of Additional Physics of the cell

m_vecTransports

Transport* Cell::m_vecTransports

protected

Array of passive variables advected in the flow

m_wall

bool Cell::m_wall

protected

Bool indicating if the cell is a solid boundary (for immersed boundaries)

m_xi

double Cell::m_xi

protected

Criteria for refine/unrefine cell

---

The documentation for this class was generated from the following files:

• /Users/fabien/depotsSephiroth/gitLab/ECOGEN/ecogen/src/Order1/Cell.h
• /Users/fabien/depotsSephiroth/gitLab/ECOGEN/ecogen/src/Order1/Cell.cpp