#include <MeshCartesian.h>

Inherits Mesh.

Collaboration diagram for MeshCartesian:

Public Member Functions
	MeshCartesian (double lX, int numberCellsX, double lY, int numberCellsY, double lZ, int numberCellsZ, std::vector< stretchZone > stretchX, std::vector< stretchZone > stretchY, std::vector< stretchZone > stretchZ)
	~MeshCartesian () override
void	assignLimits (std::vector< BoundCond * > &boundCond) override
void	getIJK (const int &index, int &i, int &j, int &k) const
void	construitIGlobal (const int &i, const int &j, const int &k, int &index) const
int	initializeGeometrie (TypeMeshContainer< Cell * > &cells, TypeMeshContainer< Cell * > &cellsGhost, TypeMeshContainer< CellInterface * > &cellInterfaces, const int &, bool, SimulationOrder schemeOrder) override
	renvoi le number de dimensions (1,2 ou 3)
void	meshStretching ()
void	initializeGeometrieMonoCpu (TypeMeshContainer< Cell * > &cells, TypeMeshContainer< CellInterface * > &cellInterfaces, SimulationOrder schemeOrder)
void	initializeGeometrieParallele (TypeMeshContainer< Cell * > &cells, TypeMeshContainer< Cell * > &cellsGhost, TypeMeshContainer< CellInterface * > &cellInterfaces, SimulationOrder schemeOrder)
void	parallelePartitioning (SimulationOrder schemeOrder, TypeMeshContainer< Cell * > &cells)
std::string	whoAmI () const override
void	setImmersedBoundaries (TypeMeshContainer< CellInterface * > *cellInterfacesLvl, SimulationOrder schemeOrder) const override
int	getNumberCellsX () const override
int	getNumberCellsY () const override
int	getNumberCellsZ () const override
int	getNumberCellsXGlobal () const override
int	getNumberCellsYGlobal () const override
int	getNumberCellsZGlobal () const override
int	getOffsetX () const override
int	getOffsetY () const override
int	getOffsetZ () const override
int	getNumberCpuX () const override
int	getNumberCpuY () const override
int	getNumberCpuZ () const override
std::string	getStringExtent (bool global=false) const override
std::array< int, 6 >	getArrayGlobalExtent () const override
	Return whole extent of global cartesian mesh under the form of an array.
void	getCoord (std::vector< double > &dataset, Axis axis, bool global=false) const override
	For structured grid, get coordinates along a given axis.
size_t	getNodes (std::vector< double > &dataset, std::vector< Cell * > *) const override
	Store coordinates of mesh nodes in a flat vector.
size_t	getConnectivity (std::vector< int64_t > &dataset, std::vector< Cell * > *) const override
	Store connectivities of mesh cells in a flat vector of 'ECOGEN_VTKHDF_intType' integers.
size_t	getConnectivity (std::vector< int32_t > &dataset, std::vector< Cell * > *) const override
	Store connectivities of mesh cells in a flat vector of 'ECOGEN_VTKHDF_intType' integers.
void	getOffsets (std::vector< int64_t > &dataset, std::vector< Cell * > *) const override
	Store offsets in connectivity array of mesh cells.
void	getOffsets (std::vector< int32_t > &dataset, std::vector< Cell * > *) const override
	Store offsets in connectivity array of mesh cells.
void	getTypeCell (std::vector< unsigned char > &dataset, std::vector< Cell * > *) const override
void	getData (TypeMeshContainer< Cell * > *cellsLvl, std::vector< double > &dataset, const int var, int phase) const override
void	getData (TypeMeshContainer< Cell * > *cellsLvl, std::vector< float > &dataset, const int var, int phase) const override
void	setDataSet (std::vector< double > &dataset, TypeMeshContainer< Cell * > *cellsLvl, const int var, int phase) const override
Public Member Functions inherited from Mesh
	Mesh ()
virtual	~Mesh ()
const int &	getProblemDimension () const
const int &	getNumberCells () const
const int &	getNumberCellsTotal () const
const int &	getNumberFaces () const
const int &	getNumFichier () const
const TypeM &	getType () const
virtual int	getLvlMax () const
void	writeResultsGnuplot (std::vector< Cell * > cellsLvl, std::ofstream &fileStream, GeometricObject objet=0, bool recordPsat=false) const
virtual void	writeHeaderPiece (std::ofstream &, std::vector< Cell * > *) const
virtual size_t	getConnectivity (std::vector< double > &, std::vector< Cell * > *) const
	Store connectivities of mesh cells in a flat vector of double.
virtual void	getOffsets (std::vector< double > &, std::vector< Cell * > *) const
	Store offsets in connectivity array of mesh cells.
virtual void	getTypeCell (std::vector< double > &, std::vector< Cell * > *) const
virtual void	getData (std::vector< Cell * > *, std::vector< double > &, const int, int) const
	Extracting data for printing results.
virtual void	getData (std::vector< Cell * > *, std::vector< float > &, const int, int) const
virtual void	setDataSet (std::vector< double > &, std::vector< Cell * > *, const int, int) const
	Extracting data for printing results.
virtual void	refineCellAndCellInterfaces (Cell , const std::vector< AddPhys > &, int &)
virtual void	extractAbsVelocityMRF (std::vector< Cell * > , std::vector< double > &, Source ) const
	Extracting absolute velocity for specific Moving Reference Frame computations.
virtual void	extractAbsVelocityMRF (std::vector< Cell * > , std::vector< float > &, Source ) const
virtual void	extractReferenceLength (std::vector< Cell * > *, std::vector< double > &) const
virtual void	extractReferenceLength (std::vector< Cell * > *, std::vector< float > &) const
virtual void	printDomainDecomposition (std::ofstream &)
virtual void	readDomainDecomposition (std::ifstream &)
virtual void	procedureRaffinementInitialization (std::vector< Cell * > , TypeMeshContainer< Cell > , std::vector< CellInterface > , const std::vector< AddPhys > &, int &nbCellsTotalAMR, std::vector< GeometricalDomain * > &, Eos *, const int &, SimulationOrder, std::vector< GeometricalDomain > &)
virtual void	procedureRaffinement (std::vector< Cell * > , TypeMeshContainer< Cell > , std::vector< CellInterface > , const int &, const std::vector< AddPhys > &, int &, Eos **)
virtual void	initializePersistentCommunications (const TypeMeshContainer< Cell * > &cells, SimulationOrder schemeOrder)
virtual void	finalizeParallele (const int &lvlMax)
virtual void	parallelLoadBalancingAMR (std::vector< Cell * > , TypeMeshContainer< Cell > , std::vector< CellInterface > , SimulationOrder, const std::vector< AddPhys > &, Eos *, int &, std::vector< GeometricalDomain > &, bool=false)
virtual std::string	getMeshExtension () const
virtual void	initCpuMeshSequential (TypeMeshContainer< Cell * > &, SimulationOrder &)
	Initialize mesh of a single partition for restart with mesh mapping option.
virtual void	initCpuMeshParallel (TypeMeshContainer< Cell * > &, SimulationOrder &, int)
	Initialize mesh of a single partition of a partionned mesh for restart with mesh mapping option.

Protected Attributes
TypeMeshContainer< Element * >	m_elements
	Vector of element objects: Contains geometrical attributes.
TypeMeshContainer< Face * >	m_faces
	Vector of face objects (between two elements or at boundaries): Contains geometrical attributes.
double	m_lX
double	m_lY
double	m_lZ
int	m_numberCellsX
int	m_numberCellsY
int	m_numberCellsZ
int	m_numberCellsXGlobal
int	m_numberCellsYGlobal
int	m_numberCellsZGlobal
std::vector< double >	m_dXi
std::vector< double >	m_dYj
std::vector< double >	m_dZk
std::vector< double >	m_posXi
std::vector< double >	m_posYj
std::vector< double >	m_posZk
std::vector< stretchZone >	m_stretchX
std::vector< stretchZone >	m_stretchY
std::vector< stretchZone >	m_stretchZ
int	m_numberCpuX
int	m_numberCpuY
int	m_numberCpuZ
int	m_CpuCoordX
int	m_CpuCoordY
int	m_CpuCoordZ
int	m_offsetX
int	m_offsetY
int	m_offsetZ
int	m_numberBoundCondInit
BoundCond *	m_limXm
BoundCond *	m_limXp
BoundCond *	m_limYm
BoundCond *	m_limYp
BoundCond *	m_limZm
BoundCond *	m_limZp
Protected Attributes inherited from Mesh
int	m_numFile
int	m_problemDimension
int	m_numberElements
int	m_numberFacesTotal
int	m_numberCellsCalcul
int	m_numberCellsTotal
TypeM	m_type

Private Member Functions
template<typename T>
size_t	getConnectivity_private (std::vector< T > &dataset) const
template<typename T>
void	getOffsets_private (std::vector< T > &dataset) const
template<typename T>
void	getData_private (TypeMeshContainer< Cell * > *cellsLvl, std::vector< T > &dataset, const int var, int phase) const

Static Private Member Functions
static void	meshStretchingAlongAxis (int &numberCells, const double &l, std::vector< double > &dl, std::vector< double > &pos, std::vector< stretchZone > &stretch)

Additional Inherited Members
Protected Member Functions inherited from Mesh
template<typename T>
void	getData_body (Cell *cell, std::vector< T > &dataset, const int var, const int phase, const bool isAMR) const
	Access data of cell cell and append the wanted variable cell in dataset vector.

Constructor & Destructor Documentation

◆ MeshCartesian()

MeshCartesian::MeshCartesian	(	double	lX,
		int	numberCellsX,
		double	lY,
		int	numberCellsY,
		double	lZ,
		int	numberCellsZ,
		std::vector< stretchZone >	stretchX,
		std::vector< stretchZone >	stretchY,
		std::vector< stretchZone >	stretchZ )

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◆ ~MeshCartesian()

MeshCartesian::~MeshCartesian ( )

override

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Member Function Documentation

◆ assignLimits()

void MeshCartesian::assignLimits ( std::vector< BoundCond * > & boundCond )

overridevirtual

Implements Mesh.

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◆ construitIGlobal()

void MeshCartesian::construitIGlobal	(	const int &	i,
		const int &	j,
		const int &	k,
		int &	index ) const

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◆ getArrayGlobalExtent()

std::array< int, 6 > MeshCartesian::getArrayGlobalExtent ( ) const

overridevirtual

Return whole extent of global cartesian mesh under the form of an array.

Reimplemented from Mesh.

◆ getConnectivity() [1/2]

size_t MeshCartesian::getConnectivity	(	std::vector< int32_t > &	,
		std::vector< Cell * > *	) const

overridevirtual

Store connectivities of mesh cells in a flat vector of 'ECOGEN_VTKHDF_intType' integers.

Returns: Cell count if success, 0 in case of overflow

Note: Check that the cell count doesn't overflow the maximal value representable by a 'size_t'. Don't check that the connectivity values fit the vector type.

Reimplemented from Mesh.

Reimplemented in MeshCartesianAMR.

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◆ getConnectivity() [2/2]

size_t MeshCartesian::getConnectivity	(	std::vector< int64_t > &	,
		std::vector< Cell * > *	) const

overridevirtual

Store connectivities of mesh cells in a flat vector of 'ECOGEN_VTKHDF_intType' integers.

Returns: Cell count if success, 0 in case of overflow

Note: Check that the cell count doesn't overflow the maximal value representable by a 'size_t'. Don't check that the connectivity values fit the vector type.

Reimplemented from Mesh.

Reimplemented in MeshCartesianAMR.

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◆ getConnectivity_private()

template<typename T>

size_t MeshCartesian::getConnectivity_private ( std::vector< T > & dataset ) const

private

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◆ getCoord()

void MeshCartesian::getCoord	(	std::vector< double > &	,
		Axis	,
		bool	global = false ) const

overridevirtual

For structured grid, get coordinates along a given axis.

Reimplemented from Mesh.

◆ getData() [1/2]

void MeshCartesian::getData	(	TypeMeshContainer< Cell * > *	cellsLvl,
		std::vector< double > &	dataset,
		const int	var,
		int	phase ) const

override

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◆ getData() [2/2]

void MeshCartesian::getData	(	TypeMeshContainer< Cell * > *	cellsLvl,
		std::vector< float > &	dataset,
		const int	var,
		int	phase ) const

override

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◆ getData_private()

template<typename T>

void MeshCartesian::getData_private	(	TypeMeshContainer< Cell * > *	cellsLvl,
		std::vector< T > &	dataset,
		const int	var,
		int	phase ) const

private

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◆ getIJK()

void MeshCartesian::getIJK	(	const int &	index,
		int &	i,
		int &	j,
		int &	k ) const

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◆ getNodes()

size_t MeshCartesian::getNodes	(	std::vector< double > &	,
		std::vector< Cell * > *	) const

overridevirtual

Store coordinates of mesh nodes in a flat vector.

Returns: Node count if success, 0 in case of overflow

Note: Check that the node count doesn't overflow the maximal value representable by a 'size_t'

Reimplemented from Mesh.

Reimplemented in MeshCartesianAMR.

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◆ getNumberCellsX()

int MeshCartesian::getNumberCellsX ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getNumberCellsXGlobal()

int MeshCartesian::getNumberCellsXGlobal ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getNumberCellsY()

int MeshCartesian::getNumberCellsY ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getNumberCellsYGlobal()

int MeshCartesian::getNumberCellsYGlobal ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getNumberCellsZ()

int MeshCartesian::getNumberCellsZ ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getNumberCellsZGlobal()

int MeshCartesian::getNumberCellsZGlobal ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getNumberCpuX()

int MeshCartesian::getNumberCpuX ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getNumberCpuY()

int MeshCartesian::getNumberCpuY ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getNumberCpuZ()

int MeshCartesian::getNumberCpuZ ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getOffsets() [1/2]

void MeshCartesian::getOffsets	(	std::vector< int32_t > &	,
		std::vector< Cell * > *	) const

overridevirtual

Store offsets in connectivity array of mesh cells.

Note: Check that the max offset doesn't overflow the maximal value representable by a int32_t variable.

Reimplemented from Mesh.

Reimplemented in MeshCartesianAMR.

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◆ getOffsets() [2/2]

void MeshCartesian::getOffsets	(	std::vector< int64_t > &	,
		std::vector< Cell * > *	) const

overridevirtual

Store offsets in connectivity array of mesh cells.

Note: Check that the max offset doesn't overflow the maximal value representable by a int64_t variable.

Reimplemented from Mesh.

Reimplemented in MeshCartesianAMR.

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◆ getOffsets_private()

template<typename T>

void MeshCartesian::getOffsets_private ( std::vector< T > & dataset ) const

private

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◆ getOffsetX()

int MeshCartesian::getOffsetX ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getOffsetY()

int MeshCartesian::getOffsetY ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getOffsetZ()

int MeshCartesian::getOffsetZ ( ) const

inlineoverridevirtual

Reimplemented from Mesh.

◆ getStringExtent()

std::string MeshCartesian::getStringExtent ( bool global = false ) const

overridevirtual

Reimplemented from Mesh.

◆ getTypeCell()

void MeshCartesian::getTypeCell	(	std::vector< unsigned char > &	dataset,
		std::vector< Cell * > *	) const

overridevirtual

Reimplemented from Mesh.

Reimplemented in MeshCartesianAMR.

◆ initializeGeometrie()

int MeshCartesian::initializeGeometrie	(	TypeMeshContainer< Cell * > &	cells,
		TypeMeshContainer< Cell * > &	cellsGhost,
		TypeMeshContainer< CellInterface * > &	cellInterfaces,
		const int &	resumeSimulation,
		bool	pretraitementParallele,
		SimulationOrder	schemeOrder )

overridevirtual

renvoi le number de dimensions (1,2 ou 3)

Implements Mesh.

Reimplemented in MeshCartesianAMR.

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◆ initializeGeometrieMonoCpu()

void MeshCartesian::initializeGeometrieMonoCpu	(	TypeMeshContainer< Cell * > &	cells,
		TypeMeshContainer< CellInterface * > &	cellInterfaces,
		SimulationOrder	schemeOrder )

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◆ initializeGeometrieParallele()

void MeshCartesian::initializeGeometrieParallele	(	TypeMeshContainer< Cell * > &	cells,
		TypeMeshContainer< Cell * > &	cellsGhost,
		TypeMeshContainer< CellInterface * > &	cellInterfaces,
		SimulationOrder	schemeOrder )

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◆ meshStretching()

void MeshCartesian::meshStretching ( )

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◆ meshStretchingAlongAxis()

void MeshCartesian::meshStretchingAlongAxis	(	int &	numberCells,
		const double &	l,
		std::vector< double > &	dl,
		std::vector< double > &	pos,
		std::vector< stretchZone > &	stretch )

staticprivate

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◆ parallelePartitioning()

void MeshCartesian::parallelePartitioning	(	SimulationOrder	schemeOrder,
		TypeMeshContainer< Cell * > &	cells )

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◆ setDataSet()

void MeshCartesian::setDataSet	(	std::vector< double > &	dataset,
		TypeMeshContainer< Cell * > *	cellsLvl,
		const int	var,
		int	phase ) const

override

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◆ setImmersedBoundaries()

void MeshCartesian::setImmersedBoundaries	(	TypeMeshContainer< CellInterface * > *	cellInterfacesLvl,
		SimulationOrder	schemeOrder ) const

overridevirtual

Reimplemented from Mesh.

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◆ whoAmI()

std::string MeshCartesian::whoAmI ( ) const

overridevirtual

Reimplemented from Mesh.

Reimplemented in MeshCartesianAMR.

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Member Data Documentation

◆ m_CpuCoordX

int MeshCartesian::m_CpuCoordX

protected

X-coordinate of the current CPU

◆ m_CpuCoordY

int MeshCartesian::m_CpuCoordY

protected

Y-coordinate of the current CPU

◆ m_CpuCoordZ

int MeshCartesian::m_CpuCoordZ

protected

Z-coordinate of the current CPU

◆ m_dXi

std::vector<double> MeshCartesian::m_dXi

protected

Array of the lengths of the cells in the x-direction

◆ m_dYj

std::vector<double> MeshCartesian::m_dYj

protected

Array of the lengths of the cells in the y-direction

◆ m_dZk

std::vector<double> MeshCartesian::m_dZk

protected

Array of the lengths of the cells in the z-direction

◆ m_elements

TypeMeshContainer<Element*> MeshCartesian::m_elements

protected

Vector of element objects: Contains geometrical attributes.

◆ m_faces

TypeMeshContainer<Face*> MeshCartesian::m_faces

protected

Vector of face objects (between two elements or at boundaries): Contains geometrical attributes.

◆ m_limXm

BoundCond* MeshCartesian::m_limXm

protected

◆ m_limXp

BoundCond* MeshCartesian::m_limXp

protected

◆ m_limYm

BoundCond* MeshCartesian::m_limYm

protected

◆ m_limYp

BoundCond* MeshCartesian::m_limYp

protected

◆ m_limZm

BoundCond* MeshCartesian::m_limZm

protected

◆ m_limZp

BoundCond* MeshCartesian::m_limZp

protected

◆ m_lX

double MeshCartesian::m_lX

protected

◆ m_lY

double MeshCartesian::m_lY

protected

◆ m_lZ

double MeshCartesian::m_lZ

protected

◆ m_numberBoundCondInit

int MeshCartesian::m_numberBoundCondInit

protected

◆ m_numberCellsX

int MeshCartesian::m_numberCellsX

protected

◆ m_numberCellsXGlobal

int MeshCartesian::m_numberCellsXGlobal

protected

◆ m_numberCellsY

int MeshCartesian::m_numberCellsY

protected

◆ m_numberCellsYGlobal

int MeshCartesian::m_numberCellsYGlobal

protected

◆ m_numberCellsZ

int MeshCartesian::m_numberCellsZ

protected

◆ m_numberCellsZGlobal

int MeshCartesian::m_numberCellsZGlobal

protected

◆ m_numberCpuX

int MeshCartesian::m_numberCpuX

protected

Optimal number of processors in the x-direction

◆ m_numberCpuY

int MeshCartesian::m_numberCpuY

protected

Optimal number of processors in the y-direction

◆ m_numberCpuZ

int MeshCartesian::m_numberCpuZ

protected

Optimal number of processors in the z-direction

◆ m_offsetX

int MeshCartesian::m_offsetX

protected

Offset in the x-direction of the current CPU for the array of cell lenghts and cell positions

◆ m_offsetY

int MeshCartesian::m_offsetY

protected

Offset in the y-direction of the current CPU for the array of cell lenghts and cell positions

◆ m_offsetZ

int MeshCartesian::m_offsetZ

protected

Offset in the z-direction of the current CPU for the array of cell lenghts and cell positions

◆ m_posXi

std::vector<double> MeshCartesian::m_posXi

protected

Array of the positions of the cells in the x-direction

◆ m_posYj

std::vector<double> MeshCartesian::m_posYj

protected

Array of the positions of the cells in the y-direction

◆ m_posZk

std::vector<double> MeshCartesian::m_posZk

protected

Array of the positions of the cells in the z-direction

◆ m_stretchX

std::vector<stretchZone> MeshCartesian::m_stretchX

protected

Array of stretch zones in the x-direction

◆ m_stretchY

std::vector<stretchZone> MeshCartesian::m_stretchY

protected

Array of stretch zones in the y-direction

◆ m_stretchZ

std::vector<stretchZone> MeshCartesian::m_stretchZ

protected

Array of stretch zones in the z-direction

The documentation for this class was generated from the following files:

/home/runner/work/ECOGEN/ECOGEN/doc_sources/src/Meshes/MeshCartesian.h
/home/runner/work/ECOGEN/ECOGEN/doc_sources/src/Meshes/MeshCartesian.cpp

Public Member Functions

Protected Attributes

Private Member Functions

Static Private Member Functions

Additional Inherited Members

Constructor & Destructor Documentation

◆ MeshCartesian()

◆ ~MeshCartesian()

Member Function Documentation

◆ assignLimits()

◆ construitIGlobal()

◆ getArrayGlobalExtent()

◆ getConnectivity() [1/2]

◆ getConnectivity() [2/2]

◆ getConnectivity_private()

◆ getCoord()

◆ getData() [1/2]

◆ getData() [2/2]

◆ getData_private()

◆ getIJK()

◆ getNodes()

◆ getNumberCellsX()

◆ getNumberCellsXGlobal()

◆ getNumberCellsY()

◆ getNumberCellsYGlobal()

◆ getNumberCellsZ()

◆ getNumberCellsZGlobal()

◆ getNumberCpuX()

◆ getNumberCpuY()

◆ getNumberCpuZ()

◆ getOffsets() [1/2]

◆ getOffsets() [2/2]

◆ getOffsets_private()

◆ getOffsetX()

◆ getOffsetY()

◆ getOffsetZ()

◆ getStringExtent()

◆ getTypeCell()

◆ initializeGeometrie()

◆ initializeGeometrieMonoCpu()

◆ initializeGeometrieParallele()

◆ meshStretching()

◆ meshStretchingAlongAxis()

◆ parallelePartitioning()

◆ setDataSet()

◆ setImmersedBoundaries()

◆ whoAmI()

Member Data Documentation

◆ m_CpuCoordX

◆ m_CpuCoordY

◆ m_CpuCoordZ

◆ m_dXi

◆ m_dYj

◆ m_dZk

◆ m_elements

◆ m_faces

◆ m_limXm

◆ m_limXp

◆ m_limYm

◆ m_limYp

◆ m_limZm

◆ m_limZp

◆ m_lX

◆ m_lY

◆ m_lZ

◆ m_numberBoundCondInit

◆ m_numberCellsX

◆ m_numberCellsXGlobal

◆ m_numberCellsY

◆ m_numberCellsYGlobal

◆ m_numberCellsZ

◆ m_numberCellsZGlobal

◆ m_numberCpuX

◆ m_numberCpuY

◆ m_numberCpuZ

◆ m_offsetX

◆ m_offsetY

◆ m_offsetZ

◆ m_posXi

◆ m_posYj